Package index • MSstatsBioNet

All functions

annotateProteinInfoFromIndra(): Annotate Protein Information from Indra

.populateHgncIdsInDataFrame(): Populate HGNC IDs in Data Frame

.populateHgncNamesInDataFrame(): Populate HGNC Names in Data Frame

.populateKinaseInfoInDataFrame(): Populate Kinase Info in Data Frame

.populatePhophataseInfoInDataFrame(): Populate Phosphatase Info in Data Frame

.populateTranscriptionFactorInfoInDataFrame(): Populate Transcription Factor Info in Data Frame

.populateUniprotIdsInDataFrame(): Populate Uniprot IDs in Data Frame

.validateAnnotateProteinInfoFromIndraInput(): Validate Annotate Protein Info Input

getPathwaysFromIndra(): Get pathways ranked on relevance from INDRA DB

getSubnetworkFromIndra(): Get subnetwork from INDRA database

visualizeNetworks(): Create visualization of network