Wrapper around `igraph::graph_from_data_frame`

Wrapper around `igraph::graph_from_data_frame`

Usage

createPeptideProteinGraph(
  quantification_data,
  protein_column = "ProteinName",
  peptide_column = "PeptideSequence",
  by_run = FALSE
)

Arguments

quantification_data

MS data, preferably in `MSstats` or `MSstatsTMT` format.

protein_column

name of a column with protein names.

peptide_column

name of a column with peptide sequences.